Paketti: sspace (2.1.1+dfsg-4)

Links for sspace

Debian-palvelut:

Imuroi lähdekoodipaketti sspace:

Ylläpitäjät:

External Resources:

Kotisivu [github.com]

Samankaltaisia paketteja:

scaffolding pre-assembled contigs after extension

SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension (SSPACE) is a script able to extend and scaffold pre-assembled contigs using one or more mate pairs or paired-end libraries, or even a combination.

SSPACE is built based on SSAKE. Code of SSAKE is changed to be able to extend and scaffold pre-assembled contigs for multiple paired reads libraries.

This is the free 'basic' version of SSPACE. The non-free 'standard' version is available directly from Baseclear.

Muut pakettiin sspace liittyvät paketit

depends

recommends

suggests

enhances

dep: bowtie

Ultrafast memory-efficient short read aligner
dep: perl

Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten
dep: python

interactive high-level object-oriented language (Python2 version)

Imuroi sspace

Imurointi kaikille saataville arkkitehtuureille
Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	1,308.3 kt	1,445.0 kt	[tiedostoluettelo]