Paketti: libchado-perl (1.31-5)

[ Source: libchado-perl  ]

database schema and tools for genomic data

Chado is a relational database schema that underlies many GMOD installations. It is capable of representing many of the general classes of data frequently encountered in modern biology such as sequence, sequence comparisons, phenotypes, genotypes, ontologies, publications, and phylogeny. It has been designed to handle complex representations of biological knowledge and should be considered one of the most sophisticated relational schemas currently available in molecular biology. The price of this capability is that the new user must spend some time becoming familiar with its fundamentals.

Tagit: Software Development: Perl Development, Kirjastot, Implemented in: Perl

Muut pakettiin libchado-perl liittyvät paketit

• dep: bioperl

  Perl tools for computational molecular biology

• dep: libbio-chado-schema-perl

  DBIx::Class layer for the Chado database schema

• dep: libcgi-session-perl

  persistent session data in CGI applications

• dep: libclass-dbi-pager-perl

  pager utility for Class::DBI

• dep: libclass-dbi-perl

  convenient abstraction layer to a database

• dep: libclass-dbi-pg-perl

  Class::DBI extension for Postgres

• dep: libdata-stag-perl

  module to manipulate Structured Tags datastructures

• dep: libdbd-pg-perl

  Perl DBI driver for the PostgreSQL database server

• dep: libdbi-perl

  Perl Database Interface (DBI)

• dep: libdbix-dbstag-perl

  module providing relational database to hierarchical mapping

• dep: libdigest-md5-file-perl

  Perl extension for getting MD5 sums for files and urls

• dep: libgd-gd2-perl

  näennäispaketti, jonka toteuttaa libgd-perl

• dep: libgo-perl

  perl modules for GO and other OBO ontologies

• dep: libgraph-perl

  Perl module for graph data structures and algorithms

• dep: liblog-log4perl-perl

  Perl port of the widely popular log4j logging package

• dep: libmodule-build-perl

  framework for building and installing Perl modules

• dep: libsql-translator-perl

  SQL translation library

• dep: libtemplate-perl

  "Template Toolkit" template processing system in Perl

• dep: libwww-perl

  simple and consistent interface to the world-wide web

• dep: libxml-libxslt-perl

  Perl interface to the GNOME libxslt library

• dep: libxml-perl

  Perl modules for working with XML

• dep: libxml-simple-perl

  Perl module for reading and writing XML

• dep: make

  utility for directing compilation

• dep: perl

  Larry Wallin kieli tekstitiedostojen analysointia ja raportointia varten

• dep: postgresql-client

  front-end programs for PostgreSQL (supported version)
  myös näennäispaketti, jonka toteuttaa postgresql-client-11

• rec: chado-utils

  tools to add/extract data from Chado

• rec: xsltproc

  XSLT 1.0 command line processor

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Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	2,226.7 kt	80,965.0 kt	[tiedostoluettelo]