Paketti: r-bioc-metagenomeseq (1.24.1-1)

[ Source: r-bioc-metagenomeseq  ]

GNU R statistical analysis for sparse high-throughput sequencing

MetagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.

Muut pakettiin r-bioc-metagenomeseq liittyvät paketit

• dep: r-api-3.5

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.8

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-base-core (>= 3.5.2-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-limma

  linear models for microarray data

• dep: r-cran-foreach

  GNU R foreach looping support

• dep: r-cran-glmnet

  Lasso and Elastic-Net Regularized Generalized Linear Models

• dep: r-cran-gplots

  GNU R package with tools for plotting data by Greg Warnes et al

• dep: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• dep: r-cran-matrixstats

  GNU R methods that apply to rows and columns of a matrix

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• rec: r-cran-testthat (>= 0.8)

  GNU R testsuite

• sug: r-bioc-annotate

  BioConductor annotation for microarrays

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-biomformat

  GNU R interface package for the BIOM file format

• sug: r-cran-gss

  GNU R package for multivariate estimation using smoothing splines

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-vegan

  Community Ecology Package for R

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