Paketti: phast (1.4+dfsg-1)

[ Source: phast  ]

phylogenetic analysis with space/time models

PHAST is a software package for comparative and evolutionary genomics. It consists of about half a dozen major programs, plus more than a dozen utilities for manipulating sequence alignments, phylogenetic trees, and genomic annotations. For the most part, PHAST focuses on two kinds of applications: the identification of novel functional elements, including protein-coding exons and evolutionarily conserved sequences; and statistical phylogenetic modeling, including estimation of model parameters, detection of signatures of selection, and reconstruction of ancestral sequences.

PHAST does not support phylogeny reconstruction or sequence alignment, and it is designed for use with DNA sequences only (see Comparison).

Muut pakettiin phast liittyvät paketit

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  tai libblas.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base

• dep: libc6 (>= 2.23)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: liblapack3

  Library of linear algebra routines 3 - shared version

  tai liblapack.so.3

  näennäispaketti, jonka toteuttaa libatlas3-base, liblapack3, libopenblas-base

• dep: libpcre3

  Old Perl 5 Compatible Regular Expression Library - runtime files

• dep: libtmglib3

  test matrix generators of LAPACK - shared version

Imuroi phast

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	2,270.0 kt	29,066.0 kt	[tiedostoluettelo]
arm64	1,337.8 kt	24,296.0 kt	[tiedostoluettelo]
armhf	1,240.9 kt	17,716.0 kt	[tiedostoluettelo]
i386	2,246.3 kt	30,268.0 kt	[tiedostoluettelo]