Paketti: ipig (0.0.r5-3)

[ Source: ipig  ]

integrating PSMs into genome browser visualisations

iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/).

iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers.

Muut pakettiin ipig liittyvät paketit

• dep: libcommons-compress-java

  Java API for working with compression and archive formats

• dep: libcommons-net-java

  Apache Commons Net - Java client API for basic Internet protocols

• dep: libjdom1-java

  lightweight and fast library using XML

• dep: libxerces2-java

  Validating XML parser for Java with DOM level 3 support

Imuroi ipig

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	160.9 kt	186.0 kt	[tiedostoluettelo]
arm64	160.9 kt	186.0 kt	[tiedostoluettelo]
armhf	160.9 kt	186.0 kt	[tiedostoluettelo]
i386	160.9 kt	186.0 kt	[tiedostoluettelo]