Paketti: stacks-web (2.2+dfsg-1)

[ Source: stacks  ]

web interface for displaying loci from short-read sequences

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

This package provides the web-based viewer which you can use to examine Stacks output that has been loaded into a MySQL database.

Muut pakettiin stacks-web liittyvät paketit

• dep: apache2

  Apache HTTP Server

  tai httpd

  näennäispaketti, jonka toteuttaa apache2, ebhttpd, lighttpd, micro-httpd, mini-httpd, nginx-extras, nginx-full, nginx-light, tntnet, webfs, yaws

• dep: default-mysql-server

  MySQL database server binaries and system database setup (metapackage)

  tai virtual-mysql-server

  näennäispaketti, jonka toteuttaa mariadb-server-10.3

• dep: libapache2-mod-php

  server-side, HTML-embedded scripting language (Apache 2 module) (default)
  myös näennäispaketti, jonka toteuttaa libapache2-mod-php7.3

  tai php-cgi

  server-side, HTML-embedded scripting language (CGI binary) (default)
  myös näennäispaketti, jonka toteuttaa php7.3-cgi

• dep: libdbd-mysql-perl

  Perl5 database interface to the MariaDB/MySQL database

• dep: php-mdb2-driver-mysql

  mysql MDB2 driver

• rec: stacks

  pipeline for building loci from short-read DNA sequences

Imuroi stacks-web

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	87.0 kt	381.0 kt	[tiedostoluettelo]