Paketti: svim (1.4.2+ds-1)

[ Source: svim  ]

Structural variant caller for long sequencing reads

SVIM is a structural variant caller for long sequencing reads. It is able to detect, classify and genotype five different classes of structural variants. Unlike existing methods, SVIM integrates information from across the genome to precisely distinguish similar events, such as tandem and interspersed duplications and simple insertions.

Muut pakettiin svim liittyvät paketit

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: python3-scipy

  scientific tools for Python 3

Imuroi svim

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	30.3 kt	236.0 kt	[tiedostoluettelo]