Paketti: libhtsjdk-java (2.23.0+dfsg-2)

[ Source: htsjdk  ]

Java API for high-throughput sequencing data (HTS) formats

HTSJDK is an implementation of a unified Java library for accessing common file formats, such as SAM (Sequence Alignment/Map) and VCF, used for high-throughput sequencing data. There are also an number of useful utilities for manipulating HTS data.

Muut pakettiin libhtsjdk-java liittyvät paketit

• dep: libcommons-compress-java

  Java API for working with compression and archive formats

• dep: libcommons-jexl2-java

  Apache Commons JEXL - Java Expression Language

• dep: libcommons-logging-java

  common wrapper interface for several logging APIs

• dep: libjaxb-java

  JAXB Reference Implementation

• dep: libngs-java

  Next Generation Sequencing language Bindings (Java bindings)

• dep: libsnappy-java

  Snappy for Java, a fast compressor/decompresser

• dep: libxz-java

  Java library with a complete implementation of XZ data compression

• sug: picard-tools

  Command line tools to manipulate SAM and BAM files

• sug: python3

  interactive high-level object-oriented language (default python3 version)

Imuroi libhtsjdk-java

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	1,569.3 kt	1,751.0 kt	[tiedostoluettelo]