Paketti: r-cran-rsgcc (1.0.6-2 ja muut)

[ Source: r-cran-rsgcc  ]

Gini correlation and clustering of gene expression data

This package provides functions for calculating associations between two genes with five correlation methods(e.g., the Gini correlation coefficient [GCC], the Pearson's product moment correlation coefficient [PCC], the Kendall tau rank correlation coefficient [KCC], the Spearman's rank correlation coefficient [SCC] and the Tukey's biweight correlation coefficient [BiWt], and three non-correlation methods (e.g., mutual information [MI] and the maximal information-based nonparametric exploration [MINE], and the euclidean distance [ED]). It can also been implemented to perform the correlation and clustering analysis of transcriptomic data profiled by microarray and RNA-Seq technologies. Additionally, this package can be further applied to construct gene co-expression networks (GCNs).

Muut pakettiin r-cran-rsgcc liittyvät paketit

• dep: libc6 (>= 2.17)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-base-core (>= 4.0.0-3)

  GNU R core of statistical computation and graphics system

• dep: r-cran-biwt

  biweight mean vector and covariance and correlation

• dep: r-cran-cairodevice

  GNU R Cairo/Gtk2 device driver package

• dep: r-cran-fbasics

  GNU R package for financial engineering -- fBasics

• dep: r-cran-gplots

  GNU R package with tools for plotting data by Greg Warnes et al

• dep: r-cran-gwidgets

  gWidgets API for Toolkit-Independent, Interactive GUIs

• dep: r-cran-gwidgetsrgtk2

  Toolkit Implementation of gWidgets for RGtk2

• dep: r-cran-minerva

  Maximal Information-Based Nonparametric Exploration

• dep: r-cran-parmigene

  Parallel Mutual Information to establish Gene Networks

• dep: r-cran-snowfall

  GNU R easier cluster computing (based on snow)

• dep: r-cran-stringr

  Make it easier to work with strings

• sug: r-bioc-ctc

  Cluster and Tree Conversion

• sug: r-cran-bigmemory

  Manage Massive Matrices with Shared Memory and Memory-Mapped Files

Imuroi r-cran-rsgcc

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
ppc64el	1.0.6-2+b1	173.9 kt	291.0 kt	[tiedostoluettelo]