Paketti: maqview (0.2.5-10)

[ Source: maqview  ]

graphical read alignment viewer for short gene sequences

Maqview is graphical read alignment viewer. It is specifically designed for the Maq alignment file and allows you to see the mismatches, base qualities and mapping qualities. Maqview is nothing fancy as Consed or GAP, but just a simple viewer for you to see what happens in a particular region.

In comparison to tgap-maq, the text-based read alignment viewer written by James Bonfield, Maqview is faster and takes up much less memory and disk space in indexing. This is possibly because tgap aims to be a general-purpose viewer but Maqview fully makes use of the fact that a Maq alignment file has already been sorted. Maqview is also efficient in viewing and provides a command-line tool to quickly retrieve any region in an Maq alignment file.

Muut pakettiin maqview liittyvät paketit

• dep: freeglut3 (>= 2.8.1)

  OpenGL Utility Toolkit

• dep: libc6 (>= 2.15) [ei arm64, ppc64el]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

• dep: libgcc-s1 (>= 3.5) [armel, armhf]

  GCC:n apukirjasto

  dep: libgcc-s1 (>= 4.2) [i386, mipsel]

• dep: libgl1

  Vendor neutral GL dispatch library -- legacy GL support

• dep: libglu1-mesa

  Mesa OpenGL utility library (GLU)

  tai libglu1

  näennäispaketti, jonka toteuttaa libglu1-mesa

• dep: libstdc++6 (>= 5)

  GNU standardi C++ -kirjasto, versio 3

Imuroi maqview

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	116.6 kt	891.0 kt	[tiedostoluettelo]
arm64	110.9 kt	851.0 kt	[tiedostoluettelo]
armel	101.2 kt	778.0 kt	[tiedostoluettelo]
armhf	101.8 kt	662.0 kt	[tiedostoluettelo]
i386	126.0 kt	910.0 kt	[tiedostoluettelo]
mips64el	120.4 kt	968.0 kt	[tiedostoluettelo]
mipsel	121.9 kt	914.0 kt	[tiedostoluettelo]
ppc64el	125.9 kt	1,146.0 kt	[tiedostoluettelo]
s390x	110.8 kt	910.0 kt	[tiedostoluettelo]