Paketti: macsyfinder (2.0~rc1-3 ja muut)

[ Source: macsyfinder  ]

detection of macromolecular systems in protein datasets

MacSyFinder is a program to model and detect macromolecular systems, genetic pathways... in protein datasets. In prokaryotes, these systems have often evolutionarily conserved properties: they are made of conserved components, and are encoded in compact loci (conserved genetic architecture). The user models these systems with MacSyFinder to reflect these conserved features, and to allow their efficient detection

This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms.

Muut pakettiin macsyfinder liittyvät paketit

• dep: hmmer

  profile hidden Markov models for protein sequence analysis

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: libjs-sphinxdoc (>= 2.4.3-5~)

  JavaScript support for Sphinx documentation

• dep: libjs-underscore

  JavaScript's functional programming helper library

• dep: ncbi-blast+

  next generation suite of BLAST sequence search tools

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-colorlog

  formatter to use with the logging module of Python 3

• dep: python3-networkx

  tool to create, manipulate and study complex networks (Python3)

• dep: python3-packaging

  core utilities for python3 packages

• dep: python3-yaml

  YAML parser and emitter for Python3

• dep: sphinx-rtd-theme-common (>= 0.5.1+dfsg)

  sphinx theme from readthedocs.org (common files)

Imuroi macsyfinder

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Versio	Paketin koko	Koko asennettuna	Tiedostot
amd64	2.0~rc1-3+b1	11,320.2 kt	33,920.0 kt	[tiedostoluettelo]
i386	2.0~rc1-3+b1	11,319.0 kt	33,920.0 kt	[tiedostoluettelo]