Paketti: ltrsift (1.0.2-9)

[ Source: ltrsift  ]

postprocessing and classification of LTR retrotransposons

LTRsift is a graphical desktop tool for semi-automatic postprocessing of de novo predicted LTR retrotransposon annotations, such as the ones generated by LTRharvest and LTRdigest. Its user-friendly interface displays LTR retrotransposon candidates, their putative families and their internal structure in a hierarchical fashion, allowing the user to "sift" through the sometimes large results of de novo prediction software. It also offers customizable filtering and classification functionality.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, User Interface: Graphical User Interface, interface::x11, role::program, Scope: Utility, Interface Toolkit: GTK, Purpose: use::analysing, use::browsing, Comparing, Data Organisation, use::viewing, x11::application

Muut pakettiin ltrsift liittyvät paketit

• dep: libc6 (>= 2.17) [arm64, ppc64el]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.7) [ei arm64, ppc64el]

• dep: libcairo2 (>= 1.2.4)

  Cairo 2D vector graphics library

• dep: libgdk-pixbuf2.0-0 (>= 2.22.0)

  GDK Pixbuf library (transitional package)

• dep: libgenometools0 (>= 1.6.1+ds)

  versatile genome analysis library

• dep: libglib2.0-0 (>= 2.35.9)

  GLib library of C routines

• dep: libgtk2.0-0 (>= 2.18.0)

  GTK graphical user interface library - old version

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• rec: last-align

  genome-scale comparison of biological sequences

• rec: ncbi-blast+

  next generation suite of BLAST sequence search tools

Imuroi ltrsift

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	106.8 kt	377.0 kt	[tiedostoluettelo]
arm64	96.1 kt	357.0 kt	[tiedostoluettelo]
armel	93.7 kt	327.0 kt	[tiedostoluettelo]
armhf	95.2 kt	279.0 kt	[tiedostoluettelo]
i386	118.4 kt	439.0 kt	[tiedostoluettelo]
mips64el	87.6 kt	405.0 kt	[tiedostoluettelo]
mipsel	90.8 kt	416.0 kt	[tiedostoluettelo]
ppc64el	106.2 kt	513.0 kt	[tiedostoluettelo]
s390x	96.1 kt	381.0 kt	[tiedostoluettelo]