Paketti: insilicoseq (1.5.2-1)

[ Source: insilicoseq  ]

sequencing simulator producing realistic Illumina reads

Primarily intended for simulating metagenomic samples, it can also be used to produce sequencing data from a single genome.

InSilicoSeq is written in Python, and use kernel density estimators to model the read quality of real sequencing data.

InSilicoSeq support substitution, insertion and deletion errors. If you don't have the use for insertion and deletion error a basic error model is provided.

Muut pakettiin insilicoseq liittyvät paketit

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-future

  Clean single-source support for Python 3 and 2 - Python 3.x

• dep: python3-joblib

  tools to provide lightweight pipelining in Python

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: python3-requests

  elegant and simple HTTP library for Python3, built for human beings

• dep: python3-scipy

  scientific tools for Python 3

Imuroi insilicoseq

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	1,434.7 kt	1,608.0 kt	[tiedostoluettelo]