Paketti: jalview (2.11.1.3+dfsg2-5)

[ Source: jalview  ]

multiple alignment editor

JalView is a Java DNA, RNA and protein sequence alignment editor that can work with sequence alignments produced by programs implementing alignment algorithms such as clustalw, kalign and t-coffee.

It has lots of features, is actively developed, and will compare advantageously to BioEdit, while being free as in free speech!

Muut pakettiin jalview liittyvät paketit

• dep: debconf

  Debianin kokoonpanonhallintajärjestelmä

• dep: debconf (>= 0.5)

  Debianin kokoonpanonhallintajärjestelmä

  tai debconf-2.0

  näennäispaketti, jonka toteuttaa cdebconf, cdebconf-udeb, debconf

• dep: default-jre

  Standard Java or Java compatible Runtime

• dep: groovy

  Agile dynamic language for the Java Virtual Machine

• dep: javahelp2

  Java based help system

• dep: libapache-mime4j-java

  MIME and RFC822 parser for Java

• dep: libaxis-java

  SOAP implementation in Java

• dep: libbiojava4.0-java

  Java API to biological data and applications (version 4)

• dep: libcommons-discovery-java

  Locates classes that implement a given Java interface

• dep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• dep: libhttpclient-java

  HTTP/1.1 compliant HTTP agent implementation

• dep: libhttpcore-java

  set of low level HTTP transport components for Java

• dep: libhttpmime-java

  HTTP/1.1 compliant HTTP agent implementation - MIME extension

• dep: libintervalstorej-java

  Java implementation of the Nested Containment List data structure

• dep: libjaba-client-java

  minimal client for the JABAWS server

• dep: libjaxrs-api-java

  Java API for RESTful Services (JAX-RS)

• dep: libjaxws-java

  JAX-WS Reference Implementation (Library)

• dep: libjersey1-client-java

  RESTful Web Services in Java (client module)

• dep: libjersey1-core-java

  RESTful Web Services in Java (core library)

• dep: libjetty9-java

  Java servlet engine and webserver -- core libraries

• dep: libjfreesvg-java

  Java graphics library to generate content in SVG format

• dep: libjmol-java

  Java library for molecular structures

• dep: libjson-simple-java

  Simple, lightweight and efficient JSON toolkit for Java

• dep: libjsoup-java

  Java HTML parser that makes sense of real-world HTML soup

• dep: libjswingreader-java

  RSS NewsFeed reader for Java

• dep: liblog4j1.2-java

  Logging library for java

• dep: libmiglayout-java

  Java Layout Manager

• dep: libslf4j-java

  Simple Logging Facade for Java

• dep: libvamsas-client-java

  library for phylogenetic tasks

• dep: varna

  Visualization Applet for RNA

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: kalign

  Global and progressive multiple sequence alignment

• sug: t-coffee

  Multiple Sequence Alignment

Imuroi jalview

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
all	6,732.2 kt	14,004.0 kt	[tiedostoluettelo]