Paketti: r-bioc-scrnaseq (2.12.0+ds-1)

[ Source: r-bioc-scrnaseq  ]

Collection of Public Single-Cell RNA-Seq Datasets

Gene-level counts for a collection of public scRNA-seq datasets, provided as SingleCellExperiment objects with cell- and gene-level metadata.

Muut pakettiin r-bioc-scrnaseq liittyvät paketit

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.16

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-annotationdbi

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-annotationhub (>= 3.3.6)

  GNU R client to access AnnotationHub resources

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-ensembldb

  GNU R utilities to create and use an Ensembl based annotation database

• dep: r-bioc-experimenthub (>= 2.3.4)

  BioConductor client to access ExperimentHub resources

• dep: r-bioc-genomicfeatures

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• sug: r-bioc-biocfilecache

  GNU R management of files across sessions

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rappdirs

  GNU R application directories

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Imuroi r-bioc-scrnaseq

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