Paketti: phyx (1.3+ds-2)

[ Source: phyx  ]

UNIX-style phylogenetic analyses on trees and sequences

phyx provides a convenient, lightweight and inclusive toolkit consisting of programs spanning the wide breadth of programs utilized by researchers performing phylogenomic analyses. Modeled after Unix/GNU/Linux command line tools, individual programs perform a single task and operate on standard I/O streams. A result of this stream-centric approach is that, for most programs, only a single sequence or tree is in memory at any moment. Thus, large datasets can be processed with minimal memory requirements. phyx’s ever-growing complement of programs consists of over 35 programs focused on exploring, manipulating, analyzing and simulating phylogenetic objects (alignments, trees and MCMC logs). As with standard Unix command line tools, these programs can be piped (together with non-phyx tools), allowing the easy construction of efficient analytical pipelines.

Muut pakettiin phyx liittyvät paketit

• dep: libarmadillo11 (>= 1:11.4.2+dfsg)

  streamlined C++ linear algebra library

• dep: libc6 (>= 2.34)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.4.4)

  GCC:n apukirjasto

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libnlopt0 (>= 2.6.1)

  nonlinear optimization library

• dep: libstdc++6 (>= 11)

  GNU standardi C++ -kirjasto, versio 3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

Imuroi phyx

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
ppc64el	2,097.4 kt	24,582.0 kt	[tiedostoluettelo]