Package: python3-pyspoa (0.2.1-2)

[ Source: python-pyspoa  ]

Python bindings to spoa

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package presents Python bindings for the spoa library

Other Packages Related to python3-pyspoa

• dep: libc6 (>= 2.32)

  Biblioteca de C de GNU: Bibliotecas compartidas
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  Biblioteca de ayuda de GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libspoa7.0.0 (>= 4.1.4)

  SIMD partial order alignment library

• dep: libstdc++6 (>= 14)

  biblioteca estándar de C++ de GNU v3

• dep: python3 (<< 3.14)

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3.12~)

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