Package: murasaki (1.68.6-14) [debports]

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homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

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• dep: libboost-iostreams1.83.0 (>= 1.83.0)

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• dep: libc6 (>= 2.38)

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• dep: libgcc-s2 (>= 4.2.1)

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• dep: libstdc++6 (>= 13.1)

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• dep: murasaki-common

  homology detection tool across multiple large genomes (common files)

Download murasaki

Download for all available architectures

Architecture	Package Size	Installed Size	Files
m68k (unofficial port)	483.4 kB	3,566.0 kB	[list of files]