Package: python3-edlib (1.2.7-6 and others)

[ Source: libedlib  ]

library for sequence alignment using edit distance (Python3 module)

A lightweight and super fast C/C++ library for sequence alignment using edit distance.

Calculating edit distance of two strings is as simple as:

 edlibAlign("hello", 5, "world!", 6,
            edlibDefaultAlignConfig()).editDistance;

Features

 * Calculates edit distance (Levehnstein distance).
 * It can find optimal alignment path (instructions how to transform
   first sequence into the second sequence).
 * It can find just the start and/or end locations of alignment path -
   can be useful when speed is more important than having exact
   alignment path.
 * Supports multiple alignment methods: global(NW), prefix(SHW) and
   infix(HW), each of them useful for different scenarios.
 * You can extend character equality definition, enabling you to e.g.
   have wildcard characters, to have case insensitive alignment or to
   work with degenerate nucleotides.
 * It can easily handle small or very large sequences, even when finding
   alignment path, while consuming very little memory.
 * Super fast thanks to Myers's bit-vector algorithm.

This package contains the Python3 module.

Other Packages Related to python3-edlib

• dep: libc6 (>= 2.17)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.3.1)

  GCC support library

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3 (<< 3.13)

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3.12~)

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Architecture	Version	Package Size	Installed Size	Files
ppc64el	1.2.7-6+b1	67.3 kB	216.0 kB	[list of files]