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[ Source: spoa  ]

Package: libspoa7.0.0 (4.1.4-2 and others)

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SIMD partial order alignment library

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package contains the shared library.

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Architecture Version Package Size Installed Size Files
i386 4.1.4-2+b1 90.5 kB505.0 kB [list of files]