Package: fastlink (4.1P-fix100+dfsg-5 and others)

[ Source: fastlink  ]

faster version of pedigree programs of Linkage

Genetic linkage analysis is a statistical technique used to map genes and find the approximate location of disease genes. There was a standard software package for genetic linkage called LINKAGE. FASTLINK is a significantly modified and improved version of the main programs of LINKAGE that runs much faster sequentially, can run in parallel, allows the user to recover gracefully from a computer crash, and provides abundant new documentation. FASTLINK has been used in over 1000 published genetic linkage studies.

This package contains the following programs:

 ilink:    GEMINI optimization procedure to find a locally
           optimal value of the theta vector of recombination
           fractions
 linkmap:  calculates location scores of one locus against a
           fixed map of other loci
 lodscore: compares likelihoods at locally optimal theta
 mlink:    calculates lod scores and risk with two of more loci
 unknown:  identify possible genotypes for unknowns

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Need an extra tag, Works with: Need an extra tag

Other Packages Related to fastlink

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• sug: fastlink-doc

  Some papers about fastlink

Download fastlink

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Architecture	Version	Package Size	Installed Size	Files
amd64	4.1P-fix100+dfsg-5	250.3 kB	859.0 kB	[list of files]
arm64	4.1P-fix100+dfsg-5+b1	240.4 kB	1,036.0 kB	[list of files]
armel	4.1P-fix100+dfsg-5	238.8 kB	922.0 kB	[list of files]
armhf	4.1P-fix100+dfsg-5	226.2 kB	662.0 kB	[list of files]
i386	4.1P-fix100+dfsg-5	248.1 kB	902.0 kB	[list of files]
mips64el	4.1P-fix100+dfsg-5	237.9 kB	1,067.0 kB	[list of files]
ppc64el	4.1P-fix100+dfsg-5	253.7 kB	1,099.0 kB	[list of files]
riscv64	4.1P-fix100+dfsg-5	267.5 kB	795.0 kB	[list of files]
s390x	4.1P-fix100+dfsg-5	281.7 kB	1,083.0 kB	[list of files]