Package: arb (6.0.6-8) [non-free]

[ Source: arb  ]

phylogenetic sequence analysis suite - main program

ARB is a graphical suite of tools for sequence database handling and data analysis. A central database of processed (aligned) sequences and any type of additional data linked to the sequence entries is structured according to phylogeny or other user-defined criteria.

The ARB project (from the Latin "arbor", a tree) is a joint initiative of the Lehrstuhl für Mikrobiologie and the LRR of the Technische Universität München in 1992. Since 2014 the ARB project is continued by the Department of Molecular Ecology http://www.mpi-bremen.de/en/Department_of_Molecular_Ecology.html at the Max Planck Institute for Marine Microbiology in Bremen in cooperation with Ribocon GmbH http://www.ribocon.com .

Tags: Implemented in: C, User Interface: Graphical User Interface, X Window System, Role: role::program, uitoolkit::motif, Interface Toolkit: X library, X Window System: Application

Other Packages Related to arb

• dep: arb-common (= 6.0.6-8)

  phylogenetic sequence analysis suite - common files

• dep: fastdnaml

  Tool for construction of phylogenetic trees of DNA sequences

• dep: fig2dev

  Utilities for converting XFig figure files

• dep: libarb (= 6.0.6-8)

  phylogenetic sequence analysis suite - libraries

• dep: libc6 (>= 2.38)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  GCC support library

• dep: libstdc++6 (>= 14)

  GNU Standard C++ Library v3

• dep: libtirpc3t64 (>= 1.0.2)

  transport-independent RPC library

• dep: libxm4 (>= 2.3.3)

  Motif - X/Motif shared library

• dep: libxt6t64

  X11 toolkit intrinsics library

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• dep: mrbayes

  Bayesian Inference of Phylogeny

• dep: openssh-client

  secure shell (SSH) client, for secure access to remote machines

• dep: phylip

  package of programs for inferring phylogenies

• dep: phyml

  Phylogenetic estimation using Maximum Likelihood

• dep: raxml

  Randomized Axelerated Maximum Likelihood of phylogenetic trees

• dep: readseq

  Conversion between sequence formats

• dep: tree-puzzle

  Reconstruction of phylogenetic trees by maximum likelihood

• dep: xdg-utils

  desktop integration utilities from freedesktop.org

• rec: bioperl

  Perl tools for computational molecular biology

• rec: xfig

  Facility for Interactive Generation of figures under X11

• sug: arb-database

  Package not available

• sug: gnuplot

  Command-line driven interactive plotting program.
  also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11

• sug: gv

  PostScript and PDF viewer for X

Download arb

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Architecture	Package Size	Installed Size	Files
armel	1,758.3 kB	6,885.0 kB	[list of files]