Package: t-coffee (13.45.0.4846264+really13.41.0.28bdc39+dfsg-1)

[ Source: t-coffee  ]

Multiple Sequence Alignment

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Need an extra tag, works-with-format::plaintext, works-with::TODO

Other Packages Related to t-coffee

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libstdc++6 (>= 4.1.1)

  GNU Standard C++ Library v3

• rec: amap-align

  Protein multiple alignment by sequence annealing

• rec: clustalo

  General-purpose multiple sequence alignment program for proteins

• rec: clustalw

  global multiple nucleotide or peptide sequence alignment

• rec: dialign-tx

  Segment-based multiple sequence alignment

• rec: fsa

  Fast Statistical Alignment of protein, RNA or DNA sequences

• rec: kalign

  Global and progressive multiple sequence alignment

• rec: libsoap-lite-perl

  Perl implementation of a SOAP client and server

• rec: libxml-simple-perl

  Perl module for reading and writing XML

• rec: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• rec: muscle

  Multiple alignment program of protein sequences

• rec: mustang

  multiple structural alignment of proteins

• rec: ncbi-blast+

  next generation suite of BLAST sequence search tools

• rec: poa

  Partial Order Alignment for multiple sequence alignment

• rec: prank

  Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

• rec: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• rec: proda

  multiple alignment of protein sequences

• rec: tm-align

  structural alignment of proteins

• sug: boxshade

  Pretty-printing of multiple sequence alignments

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

• sug: t-coffee-examples

  annotated examples for the use of T-Coffee

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Architecture	Package Size	Installed Size	Files
arm64	894.1 kB	2,634.0 kB	[list of files]