Package: ampliconnoise (1.29-15) [debports]

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removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Other Packages Related to ampliconnoise

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgsl28 (>= 2.8+dfsg)

  GNU Scientific Library (GSL) -- library package

• dep: libmpich12 (>= 4.2.0)

  Shared libraries for MPICH

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• rec: mpi-default-bin

  Standard MPI runtime programs (metapackage)

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Architecture	Package Size	Installed Size	Files
x32 (unofficial port)	1,079.1 kB	2,006.0 kB	[list of files]