Package: relion (3.1.3-4 and others)

[ Source: relion  ]

toolkit for 3D reconstructions in cryo-electron microscopy

RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy.

RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions, optionally with CUDA/GPU support.

relion provides the serial and parallel (MPI) command-line tools without CUDA/GPU support.

Other Packages Related to relion

• dep: libc6 (>= 2.38) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libfftw3-double3 (>= 3.3.10)

  Library for computing Fast Fourier Transforms - Double precision

• dep: libfftw3-single3 (>= 3.3.10)

  Library for computing Fast Fourier Transforms - Single precision

• dep: libgcc-s1 (>= 3.0) [amd64, arm64, i386, mips64el, ppc64, ppc64el, s390x, x32]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, riscv64, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [ia64, sh4]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libmpich12 [armel, armhf, hppa, i386, m68k, sh4]

  Shared libraries for MPICH

  dep: libmpich12 (>= 4.2.0) [x32]

• dep: libopenmpi3t64 (>= 4.1.6) [ia64]

  high performance message passing library -- shared library

• dep: libopenmpi40 (>= 5.0.6) [not armel, armhf, hppa, i386, ia64, m68k, sh4, x32]

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 13.1) [ia64, m68k]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [not ia64, m68k]

• dep: libtiff6 (>= 4.0.3)

  Tag Image File Format (TIFF) library

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: mpi-default-bin [not ia64]

  Standard MPI runtime programs (metapackage)

• dep: openmpi-gcc [ia64]

  Package not available

  or openmpi-bin

  high performance message passing library -- binaries

Download relion

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	3.1.3-4+b1	13,278.7 kB	108,031.0 kB	[list of files]
amd64	3.1.3-4+b1	15,273.7 kB	101,385.0 kB	[list of files]
arm64	3.1.3-4+b1	12,527.4 kB	89,993.0 kB	[list of files]
armel	3.1.3-4	12,728.1 kB	91,057.0 kB	[list of files]
armhf	3.1.3-4	10,476.7 kB	62,357.0 kB	[list of files]
hppa (unofficial port)	3.1.3-4	11,320.2 kB	86,763.0 kB	[list of files]
i386	3.1.3-4	14,995.0 kB	105,317.0 kB	[list of files]
ia64 (unofficial port)	3.1.3-3+b2	17,296.3 kB	186,840.0 kB	[list of files]
m68k (unofficial port)	3.1.3-4	11,646.9 kB	117,001.0 kB	[list of files]
mips64el	3.1.3-4+b1	10,538.8 kB	101,982.0 kB	[list of files]
ppc64 (unofficial port)	3.1.3-4+b1	12,487.7 kB	110,921.0 kB	[list of files]
ppc64el	3.1.3-4+b1	13,152.3 kB	109,961.0 kB	[list of files]
riscv64	3.1.3-4+b1	12,432.0 kB	69,581.0 kB	[list of files]
s390x	3.1.3-4+b1	13,080.4 kB	100,789.0 kB	[list of files]
sh4 (unofficial port)	3.1.3-4	12,927.7 kB	96,849.0 kB	[list of files]
sparc64 (unofficial port)	3.1.3-4+b1	10,588.7 kB	113,206.0 kB	[list of files]
x32 (unofficial port)	3.1.3-4	14,738.0 kB	96,157.0 kB	[list of files]