Package: biosquid (1.9g+cvs20050121-15.1 and others)

[ Source: biosquid  ]

utilities for biological sequence analysis

SQUID is a library of C code functions for sequence analysis. It also includes a number of small utility programs to convert, show statistics, manipulate and do other functions on sequence files.

The original name of the package is "squid", but since there is already a squid on the archive (a proxy cache), it was renamed to "biosquid".

This package contains some tools to demonstrate the features of the SQUID library.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, use::converting, Editing, Supports Format: works-with-format::TODO, works-with::TODO

Other Packages Related to biosquid

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libsquid1t64 (= 1.9g+cvs20050121-15.1+b1)

  biosquid dynamic library for biological sequence analysis

• rec: hmmer

  profile hidden Markov models for protein sequence analysis

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Architecture	Version	Package Size	Installed Size	Files
ppc64el	1.9g+cvs20050121-15.1+b1	83.1 kB	922.0 kB	[list of files]