Package: anfo (0.98-9)

[ Source: anfo  ]

Short Read Aligner/Mapper from MPG

Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes more after BLAST/BLAT. It's most useful for the alignment of sequencing reads where the DNA sequence is somehow modified (think ancient DNA or bisulphite treatment) and/or there is more divergence between sample and reference than what fast mappers will handle gracefully (say the reference genome is missing and a related species is used instead).

Other Packages Related to anfo

• dep: libanfo0 (>= 0.98)

  Library for Short Read Aligner/Mapper from MPG

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libelk0

  implementation of Scheme (the Extension Language Kit)

• dep: libgcc-s1 (>= 3.0)

  GCC support library

• dep: libpopt0 (>= 1.14)

  lib for parsing cmdline parameters

• dep: libprotobuf23 (>= 3.12.4)

  protocol buffers C++ library

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

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Architecture	Package Size	Installed Size	Files
mips64el	109.6 kB	438.0 kB	[list of files]