Package: twopaco (1.0.0+dfsg-1) [debports]

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build the compacted de Bruijn graph from many complete genomes

TwoPaCo is an implementation of the algorithm described in the paper "TwoPaCo: An efficient algorithm to build the compacted de Bruijn graph from many complete genomes".

This package contains two programs:

 twopaco: tool for direct construction of the compressed graph from
          multiple complete genomes
 graphdump: utility that turns output of twopaco into a text format

Other Packages Related to twopaco

• dep: libc6.1 (>= 2.36)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: libtbb12 (>= 2021.8.0)

  parallelism library for C++ - runtime files

• dep: libtbbmalloc2 (>= 2021.8.0)

  parallelism helper library for C++ - runtime files

• dep: libunwind8

  library to determine the call-chain of a program - runtime

Download twopaco

Download for all available architectures

Architecture	Package Size	Installed Size	Files
ia64 (unofficial port)	398.4 kB	3,195.0 kB	[list of files]