Package: python3-pyspoa (0.0.10-1 and others) [debports]

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Python bindings to spoa

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

This package presents Python bindings for the spoa library

Other Packages Related to python3-pyspoa

• dep: libc6.1 (>= 2.37)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libspoa7.0.0 (>= 4.0.8)

  SIMD partial order alignment library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8

  library to determine the call-chain of a program - runtime

• dep: python3 (<< 3.13)

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (>= 3.11~)

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Architecture	Version	Package Size	Installed Size	Files
ia64 (unofficial port)	0.0.10-1+b1	90.3 kB	498.0 kB	[list of files]