Package: libgkarrays-dev (2.1.0+dfsg-4.2) [debports]

[ Source:  ]

library to query large collection of NGS sequences (development)

Gk-arrays are provided as a simple-to-use C++ library dedicated to queries on large collection of sequences as produced by high-throughput sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).

Gk-arrays index k-mers of reads and allows one to answer different queries on that read collection (e.g. how many reads share this k-mer? where does this k-mer occur in the read collection?).

Gk-arrays consist of a space-efficient alternative to hash tables while being similar in terms of query times.

This is the development library for libgkarrays.

Other Packages Related to libgkarrays-dev

• dep: libgkarrays1t64 (= 2.1.0+dfsg-4.2)

  library to query large collection of NGS sequences

Download libgkarrays-dev

Download for all available architectures

Architecture	Package Size	Installed Size	Files
ia64 (unofficial port)	100.7 kB	607.0 kB	[list of files]