[ Source: seqtk ]
Package: seqtk (1.4-2)
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- Homepage [github.com]
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Fast and lightweight tool for processing sequences in the FASTA or FASTQ format
Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences.
Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed.
Other Packages Related to seqtk
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download seqtk
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| i386 | 37.3 kB | 103.0 kB | [list of files] |