Package: fml-asm (0.1+git20190320.b499514-1 and others) [debports]
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tool for assembling Illumina short reads in small regions
Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.
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Download fml-asm
| Architecture | Version | Package Size | Installed Size | Files |
|---|---|---|---|---|
| hppa (unofficial port) | 0.1+git20190320.b499514-1+b2 | 81.0 kB | 197.0 kB | [list of files] |