Package: freebayes (1.3.7-1)

[ Source: freebayes  ]

Bayesian haplotype-based polymorphism discovery and genotyping

FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.

Other Packages Related to freebayes

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 4.5)

  GCC support library

• dep: libseqlib2 (>= 1.2.0+dfsg)

  C++ htslib/bwa-mem/fermi interface for interrogating sequence data

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libtabixpp0 (>= 1.0.0)

  C++ wrapper to tabix indexer

• dep: libvcflib2 (>= 1.0.9+dfsg1)

  C++ library for parsing and manipulating VCF files

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

• rec: parallel

  build and execute command lines from standard input in parallel

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