[ Source: htslib ]
Package: tabix (1.21+ds-0+exp2)
Links for tabix
Debian Resources:
Download Source Package htslib:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Charles Plessy (QA Page)
- Andreas Tille (QA Page)
- Michael R. Crusoe (QA Page)
- Steffen Moeller (QA Page)
- Étienne Mollier (QA Page)
External Resources:
- Homepage [github.com]
Similar packages:
Experimental package
Warning: This package is from the experimental distribution. That means it is likely unstable or buggy, and it may even cause data loss. Please be sure to consult the changelog and other possible documentation before using it.
generic indexer for TAB-delimited genome position files
Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.
This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.
Other Packages Related to tabix
|
|
|
|
-
- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libdeflate0 (>= 1.0)
- fast, whole-buffer DEFLATE-based compression and decompression
-
- dep: libhtscodecs2 (>= 1.3.0)
- Custom compression for CRAM and others
-
- dep: liblzma5 (>= 5.1.1alpha+20120614)
- XZ-format compression library
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Download tabix
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| i386 | 528.3 kB | 2,629.0 kB | [list of files] |