Package: beagle (5.0-180928+dfsg-1+deb10u1)

[ Source: beagle  ]

Genotype calling, genotype phasing and imputation of ungenotyped markers

Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::java, interface::commandline, Role: Program, Purpose: Analysing

Other Packages Related to beagle

• dep: default-jre

  Standard Java or Java compatible Runtime

  or java11-runtime

  virtual package provided by default-jre, openjdk-11-jre

• dep: libhtsjdk-java

  Java API for high-throughput sequencing data (HTS) formats

• sug: beagle-doc

  Documentation for Beagle

Download beagle

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	273.8 kB	573.0 kB	[list of files]