Package: r-bioc-cner (1.18.1+dfsg-1)

[ Source: r-bioc-cner  ]

CNE Detection and Visualization

Large-scale identification and advanced visualization of sets of conserved noncoding elements.

Other Packages Related to r-bioc-cner

• dep: libc6 (>= 2.4)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: r-api-3.5

  virtual package provided by r-base-core

• dep: r-base-core (>= 3.5.1-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-annotate (>= 1.50.0)

  BioConductor annotation for microarrays

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.33.4)

  GNU R string objects representing biological sequences

• dep: r-bioc-genomeinfodb (>= 1.1.3)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicalignments (>= 1.1.9)

  BioConductor representation and manipulation of short genomic alignments

• dep: r-bioc-genomicranges (>= 1.23.16)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-go.db (>= 3.3.0)

  annotation maps describing the entire Gene Ontology

• dep: r-bioc-iranges (>= 2.5.27)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-keggrest (>= 1.14.0)

  GNU R client-side REST access to KEGG

• dep: r-bioc-rtracklayer (>= 1.25.5)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.13.13)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-xvector (>= 0.5.4)

  BioConductor representation and manpulation of external sequences

• dep: r-cran-dbi (>= 0.7)

  GNU R package providing a generic database interface

• dep: r-cran-ggplot2 (>= 2.1.0)

  implementation of the Grammar of Graphics

• dep: r-cran-powerlaw (>= 0.60.3)

  GNU R analysis of heavy tailed distributions

• dep: r-cran-r.utils (>= 2.3.0)

  GNU R various programming utilities

• dep: r-cran-readr (>= 0.2.2)

  GNU R package to read rectangular text data

• dep: r-cran-reshape2 (>= 1.4.1)

  Flexibly reshape data: a reboot of the reshape package

• dep: r-cran-rsqlite (>= 0.11.4)

  Database Interface R driver for SQLite

• dep: zlib1g (>= 1:1.1.4)

  compression library - runtime

• sug: r-bioc-gviz (>= 1.7.4)

  Plotting data and annotation information along genomic coordinates

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-testthat

  GNU R testsuite

Download r-bioc-cner

Download for all available architectures

Architecture	Package Size	Installed Size	Files
i386	8,095.6 kB	17,880.0 kB	[list of files]