Package: r-bioc-singlecellexperiment (1.12.0+ds-1)

[ Source: r-bioc-singlecellexperiment  ]

S4 Classes for Single Cell Data

Defines a S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.

Other Packages Related to r-bioc-singlecellexperiment

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.12

  virtual package provided by r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-matrix

  GNU R package of classes for dense and sparse matrices

• sug: r-cran-rmarkdown

  convert R markdown documents into a variety of formats

• sug: r-cran-rtsne

  GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut

Download r-bioc-singlecellexperiment

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	740.3 kB	1,375.0 kB	[list of files]