Package: kalign (1:3.3-1 and others)

Links for kalign

Debian Resources:

Download Source Package kalign:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [msa.sbc.su.se]

Similar packages:

Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

Other Packages Related to kalign

depends

recommends

suggests

enhances

dep: libc6 (>= 2.29)

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
dep: libgomp1 (>= 6)

GCC OpenMP (GOMP) support library

enh: bioperl-run

BioPerl wrappers: scripts
enh: t-coffee

Multiple Sequence Alignment

Download kalign

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
mips64el	1:3.3-1+b3	71.1 kB	223.0 kB	[list of files]