Package: minia (3.2.1+git20200522.4960a99-1)

[ Source: minia  ]

short-read biological sequence assembler

Short-read DNA sequence assembler based on a de Bruijn graph, capable of assembling a human genome on a desktop computer in a day.

The output of Minia is a set of contigs. Minia produces results of similar contiguity and accuracy to other de Bruijn assemblers (e.g. Velvet).

Other Packages Related to minia

• dep: bc

  GNU bc arbitrary precision calculator language

• dep: libc6 (>= 2.4)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgatbcore3 (>= 1.4.2+dfsg)

  dynamic library of the Genome Analysis Toolbox

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libhdf5-103-1

  HDF5 C runtime files - serial version

• dep: libstdc++6 (>= 9)

  GNU Standard C++ Library v3

• dep: zlib1g

  compression library - runtime

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• sug: bandage

  Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Download minia

Download for all available architectures

Architecture	Package Size	Installed Size	Files
i386	397.0 kB	742.0 kB	[list of files]