Package: deepnano (0.0+git20170813.e8a621e-3.1)

[ Source: deepnano  ]

alternative basecaller for MinION reads of genomic sequences

DeepNano is alternative basecaller for Oxford Nanopore MinION reads based on deep recurrent neural networks.

Currently it works with SQK-MAP-006 and SQK-MAP-005 chemistry and as a postprocessor for Metrichor.

Other Packages Related to deepnano

• dep: deepnano-data

  alternative basecaller for MinION reads of genomic sequences (data)

• dep: libc6 (>= 2.29)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc1 (>= 1:3.0)

  Package not available

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-dateutil

  powerful extensions to the standard Python 3 datetime module

• dep: python3-h5py

  general-purpose Python interface to hdf5

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-theano

  CPU/GPU math expression compiler for Python 3

• rec: python3-watchdog

  Python API and shell utilities to monitor file system events

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Architecture	Package Size	Installed Size	Files
amd64	20.1 kB	98.0 kB	[list of files]