Package: ont-fast5-api (4.1.1+dfsg-2 and others)

[ Source: ont-fast5-api  ]

simple interface to HDF5 files of the Oxford Nanopore .fast5 file format

Ont_fast5_api is a simple interface to HDF5 files of the Oxford Nanopore .fast5 file format.

It provides:

 * Concrete implementation of the fast5 file schema using the generic h5py
   library
 * Plain-english-named methods to interact with and reflect the fast5 file
   schema
 * Tools to convert between multi_read and single_read formats
 * Tools to compress/decompress raw data in files

Other Packages Related to ont-fast5-api

• dep: libc6 (>= 2.14) [amd64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.17) [arm64, ppc64el]

  dep: libc6 (>= 2.4) [not amd64, arm64, ppc64el]

• dep: libgcc-s1 (>= 3.0) [not armel, armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 4.4)

  GNU Standard C++ Library v3

• dep: libvbz-hdf-plugin-dev

  VBZ compression plugin for nanopore signal data (devel)

• dep: libzstd1 (>= 1.5.2)

  fast lossless compression algorithm

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

• dep: python3-h5py

  general-purpose Python interface to hdf5

• dep: python3-numpy

  Fast array facility to the Python 3 language

• dep: python3-packaging

  core utilities for python3 packages

• dep: python3-progressbar

  text progress bar library for Python (Python 3)

Download ont-fast5-api

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
amd64	4.1.1+dfsg-2+b1	49.6 kB	257.0 kB	[list of files]
arm64	4.1.1+dfsg-2+b1	47.9 kB	277.0 kB	[list of files]
armel	4.1.1+dfsg-2+b1	45.9 kB	276.0 kB	[list of files]
armhf	4.1.1+dfsg-2+b1	46.3 kB	276.0 kB	[list of files]
i386	4.1.1+dfsg-2+b1	48.3 kB	236.0 kB	[list of files]
mips64el	4.1.1+dfsg-2+b1	48.0 kB	279.0 kB	[list of files]
mipsel	4.1.1+dfsg-2+b1	46.6 kB	278.0 kB	[list of files]
ppc64el	4.1.1+dfsg-2+b1	50.3 kB	341.0 kB	[list of files]