[ Source: sumaclust ]
Package: sumaclust (1.0.36+ds-2)
Links for sumaclust
Debian Resources:
Download Source Package sumaclust:
Maintainers:
- Debian Med Packaging Team (QA Page, Mail Archive)
- Tim Booth (QA Page)
- Andreas Tille (QA Page)
- Pierre Gruet (QA Page)
External Resources:
- Homepage [metabarcoding.org]
Similar packages:
fast and exact clustering of genomic sequences
With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.
Other Packages Related to sumaclust
|
|
|
|
-
- dep: libc6 (>= 2.7)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
-
- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
-
- dep: libsuma1 (>= 1.0.35)
- shared library for sumatra and sumaclust
Download sumaclust
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| i386 | 100.9 kB | 163.0 kB | [list of files] |