Paket: seqmagick (0.8.6-3)

[ Quellcode: seqmagick  ]

imagemagick-like frontend to Biopython SeqIO

Seqmagick is a little utility to expose the file format conversion in BioPython in a convenient way.

Features include:

 * Modifying sequences:
   - Remove gaps
   - Reverse & reverse complement
   - Trim to a range of residues
   - Change case
   - Sort by length or ID
 * Displaying information about sequence files
 * Subsetting sequence files by:
   - Position
   - ID
   - Deduplication
 * Filtering sequences by quality score
 * Trimming alignments to a region of interest defined by the forward
   and reverse primers

Andere Pakete mit Bezug zu seqmagick

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python-3-Bibliothek für die Bioinformatik

• dep: python3-pygtrie

  Python library implementing a trie data structure (Python 3)

seqmagick herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
all	39,1 kB	214,0 kB	[Liste der Dateien]