Paket: busco (5.5.0-3)

[ Quellcode: busco  ]

benchmarking sets of universal single-copy orthologs

Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO).

 * Automated selection of lineages issued from https://www.orthodb.org/
 * Automated download of all necessary files and datasets to conduct a run
 * Use prodigal for non-eukaryotic genomes

Andere Pakete mit Bezug zu busco

• dep: bbmap

  BBTools genomic aligner and other tools for short sequences

• dep: hmmer

  Profil-Hidden-Markov-Modelle für Protein-Sequenzanalyse

• dep: prodigal

  Microbial (bacterial and archaeal) gene finding program

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python-3-Bibliothek für die Bioinformatik

• dep: python3-pandas

  data structures for "relational" or "labeled" data

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Architektur	Paketgröße	Größe (installiert)	Dateien
amd64	286,0 kB	1.236,0 kB	[Liste der Dateien]