Paket: r-bioc-biovizbase (1.22.0-2) [debports]

[ Quellcode:  ]

GNU R basic graphic utilities for visualization of genomic data

The biovizBase package is designed to provide a set of utilities, color schemes and conventions for genomic data. It serves as the base for various high-level packages for biological data visualization. This saves development effort and encourages consistency.

Andere Pakete mit Bezug zu r-bioc-biovizbase

• dep: libc6 (>= 2.2)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: r-api-3

  Paket nicht verfügbar

• dep: r-base-core (>= 3.3.2-1)

  GNU R - System für statistische Berechnungen und Grafik - Kern

• dep: r-bioc-annotationdbi

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.33.11)

  GNU R string objects representing biological sequences

• dep: r-bioc-ensembldb (>= 1.3.8)

  GNU R utilities to create and use an Ensembl based annotation database

• dep: r-bioc-genomeinfodb (>= 1.5.14)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicalignments (>= 1.1.16)

  BioConductor representation and manipulation of short genomic alignments

• dep: r-bioc-genomicfeatures (>= 1.21.19)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.23.21)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 1.99.28)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools (>= 1.17.28)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-s4vectors (>= 0.9.25)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-bioc-variantannotation (>= 1.11.4)

  BioConductor annotation of genetic variants

• dep: r-cran-dichromat

  GNU R color schemes for dichromats

• dep: r-cran-hmisc

  Verschiedene Funktionen für GNU R von Frank Harrell

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• dep: r-cran-scales

  Skalierungsfunktionen zur Visualisierung

• sug: r-bioc-bsgenome

  BioConductor infrastructure for Biostrings-based genome data packages

• sug: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• sug: r-cran-runit

  GNU-R-Paket, das ein Programmiergerüst für Komponententests bereitstellt

r-bioc-biovizbase herunterladen

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Architektur	Paketgröße	Größe (installiert)	Dateien
sparc64 (inoffizielle Portierung)	2.478,3 kB	2.861,0 kB	[Liste der Dateien]