Paket: skewer (0.2.2-6) [debports]
Links für skewer
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Externe Ressourcen:
- Homepage [github.com]
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post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
Andere Pakete mit Bezug zu skewer
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- dep: libc6 (>= 2.17)
- GNU-C-Bibliothek: Laufzeitbibliotheken
auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC Support-Bibliothek
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- dep: libstdc++6 (>= 11)
- GNU-Implementierung der Standard-C++-Bibliothek (Version 3)
skewer herunterladen
Architektur | Paketgröße | Größe (installiert) | Dateien |
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ppc64 (inoffizielle Portierung) | 83,7 kB | 235,0 kB | [Liste der Dateien] |