Paket: r-bioc-scuttle (1.16.0+dfsg-3) [debports]

[ Quellcode:  ]

BioConductor single-cell RNA-Seq analysis utilities

Provides basic utility functions for performing single-cell analyses, focusing on simple normalization, quality control and data transformations. Also provides some helper functions to assist development of other packages.

Andere Pakete mit Bezug zu r-bioc-scuttle

• dep: libc6 (>= 2.11)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC Support-Bibliothek

• dep: liblapack3

  Bibliothek von Routinen für Lineare Algebra (3) - gemeinsame Version

  oder liblapack.so.3

  virtuelles Paket, bereitgestellt durch libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libstdc++6 (>= 14)

  GNU-Implementierung der Standard-C++-Bibliothek (Version 3)

• dep: r-api-4.0

  virtuelles Paket, bereitgestellt durch r-base-core

• dep: r-api-bioc-3.20

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-s4arrays

  foundation of array-like containers in Bioconductor

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-sparsearray

  efficient in-memory representation of multidimensional sparse arrays

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-matrix

  GNU R - Paket von Klassen für dicht und dünn besetzte Matrizen

• dep: r-cran-rcpp

  GNU-R-Paket für die nahtlose Verflechtung von R und C++

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• sug: r-bioc-scran

  BioConductor methods for single-cell RNA-Seq data analysis

• sug: r-bioc-scrnaseq

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-bioc-sparsematrixstats

  BioConductor summary statistics for rows and columns of sparse matrices

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rmarkdown

  Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

• sug: r-cran-testthat

  GNU R testsuite

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Architektur	Paketgröße	Größe (installiert)	Dateien
ppc64 (inoffizielle Portierung)	437,5 kB	941,0 kB	[Liste der Dateien]