Paket: damapper (0.0+git20210330.ab45103-2) [debports]

[ Quellcode:  ]

long read to reference genome mapping tool

Recognised as the Damapper Library, this is a long read to reference genome mapping command line tool.

For a given reference database 'X' and read block 'Y', damapper produces the single file 'Y.X.las'. Each output file is sorted in order of the A-reads, and if a match is a chain of local alignments, then the LA's in the chain occur in increasing order of A-coordinates.

HPC.damapper writes a UNIX shell script to the standard output that maps every read in blocks <first> to <last> of database <reads> to a reference sequence <ref>. If <last> is missing then only the single block <first> is mapped, and if <first> is also missing then all blocks of the database are mapped.

This package contains the damapper and HPC.damapper binaries.

Andere Pakete mit Bezug zu damapper

• dep: libc6.1 (>= 2.37)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6.1-udeb

damapper herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
ia64 (inoffizielle Portierung)	128,4 kB	549,0 kB	[Liste der Dateien]