Paket: r-bioc-scran (1.34.0+dfsg-1)

[ Quellcode: r-bioc-scran  ]

Experimentelles Paket

Warnung: Dieses Paket stammt aus der Experimental-Distribution. Dies bedeutet, dass es höchstwahrscheinlich instabil oder fehlerhaft ist und sogar Datenverlust verursachen kann. Bitte lesen Sie den Changelog und andere möglicherweise verfügbare Dokumentation, bevor Sie es benutzen.

BioConductor methods for single-cell RNA-Seq data analysis

Implements functions for low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.

Andere Pakete mit Bezug zu r-bioc-scran

• dep: libc6 (>= 2.29)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC Support-Bibliothek

• dep: liblapack3

  Bibliothek von Routinen für Lineare Algebra (3) - gemeinsame Version

  oder liblapack.so.3

  Paket nicht verfügbar

• dep: libstdc++6 (>= 14)

  GNU-Implementierung der Standard-C++-Bibliothek (Version 3)

• dep: r-api-4.0

  Paket nicht verfügbar

• dep: r-api-bioc-3.20

  virtuelles Paket, bereitgestellt durch r-bioc-biocgenerics

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocgenerics

  generic functions for Bioconductor

• dep: r-bioc-biocparallel

  BioConductor facilities for parallel evaluation

• dep: r-bioc-biocsingular

  Singular Value Decomposition for Bioconductor Packages

• dep: r-bioc-bluster

  Clustering Algorithms for Bioconductor

• dep: r-bioc-delayedarray

  BioConductor delayed operations on array-like objects

• dep: r-bioc-edger

  Empirische Analyse von digitalen Genexpressionsdaten mit R

• dep: r-bioc-limma

  linear models for microarray data

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-metapod

  GNU R meta-analyses on P-Values of differential analyses

• dep: r-bioc-s4arrays

  foundation of array-like containers in Bioconductor

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-summarizedexperiment

  BioConductor assay container

• dep: r-cran-bh

  (Virtual) GNU R package to provide BH

• dep: r-cran-dqrng

  GNU R fast pseudo random number generators

• dep: r-cran-igraph

  GNU R network analysis and visualization

• dep: r-cran-matrix

  GNU R - Paket von Klassen für dicht und dünn besetzte Matrizen

• dep: r-cran-rcpp

  GNU-R-Paket für die nahtlose Verflechtung von R und C++

• dep: r-cran-statmod

  GNU R package providing algorithms and functions for statistical modeling

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-delayedmatrixstats

  Functions on Rows and Columns of 'DelayedMatrix' Objects

• sug: r-bioc-deseq2

  R package for RNA-Seq Differential Expression Analysis

• sug: r-bioc-hdf5array

  HDF5 backend for DelayedArray objects

• sug: r-bioc-residualmatrix

  Creating a DelayedMatrix of Regression Residuals

• sug: r-bioc-scaledmatrix

  creating a DelayedMatrix of scaled and centered values using GNU R

• sug: r-bioc-scater

  Single-Cell Analysis Toolkit for Gene Expression Data in R

• sug: r-bioc-scrnaseq

  Collection of Public Single-Cell RNA-Seq Datasets

• sug: r-cran-dynamictreecut

  Methods for Detection of Clusters in Hierarchical Clustering

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-pheatmap

  GNU R package to create pretty heatmaps

• sug: r-cran-rmarkdown

  Konvertierung von R-Markdown-Dokumenten in verschiedene Formate

• sug: r-cran-testthat

  GNU R testsuite

r-bioc-scran herunterladen

Download für alle verfügbaren Architekturen

Architektur	Paketgröße	Größe (installiert)	Dateien
arm64	976,8 kB	1.429,0 kB	[Liste der Dateien]