Paket: phast (1.4+dfsg-1)

[ Quellcode: phast  ]

phylogenetic analysis with space/time models

PHAST is a software package for comparative and evolutionary genomics. It consists of about half a dozen major programs, plus more than a dozen utilities for manipulating sequence alignments, phylogenetic trees, and genomic annotations. For the most part, PHAST focuses on two kinds of applications: the identification of novel functional elements, including protein-coding exons and evolutionarily conserved sequences; and statistical phylogenetic modeling, including estimation of model parameters, detection of signatures of selection, and reconstruction of ancestral sequences.

PHAST does not support phylogeny reconstruction or sequence alignment, and it is designed for use with DNA sequences only (see Comparison).

Andere Pakete mit Bezug zu phast

• dep: libblas3

  Grundlegende Unterprogramme für Lineare Algebra, gemeinsame Bibliothek

  oder libblas.so.3

  virtuelles Paket, bereitgestellt durch libatlas3-base, libblas3, libblis2-openmp, libblis2-pthread, libblis2-serial, libopenblas-base

• dep: libc6 (>= 2.23)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: liblapack3

  Bibliothek von Routinen für Lineare Algebra (3) - gemeinsame Version

  oder liblapack.so.3

  virtuelles Paket, bereitgestellt durch libatlas3-base, liblapack3, libopenblas-base

• dep: libpcre3

  Alte »Perl 5 Compatible Regular Expression Library« - Laufzeitdateien

• dep: libtmglib3

  test matrix generators of LAPACK - shared version

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Architektur	Paketgröße	Größe (installiert)	Dateien
armhf	1.240,9 kB	17.716,0 kB	[Liste der Dateien]